Novel Approaches to DNA Sequencing
from
Monday 10 June 2013 (09:30)
to
Friday 14 June 2013 (15:00)
Monday 10 June 2013
09:30
Registration
Registration
09:30 - 10:30
Room: 122:026
10:30
welcome coffee
welcome coffee
10:30 - 11:00
Room: 122:026
11:00
Cranking up the signal-to-noise ratio at MHz bandwidth
-
Marija Drndic
Cranking up the signal-to-noise ratio at MHz bandwidth
Marija Drndic
11:00 - 11:45
Room: 122:026
11:45
Using heat, charge and electric field to control DNA translocation through nanopores
-
Aleksei Aksimentiev
Using heat, charge and electric field to control DNA translocation through nanopores
Aleksei Aksimentiev
11:45 - 12:30
Room: 122:026
12:30
lunch
lunch
12:30 - 13:30
Room: 122:026
13:30
Massively parallel sequencing used for single cells at SciLifeLab
-
Joakim Lundeberg
Massively parallel sequencing used for single cells at SciLifeLab
Joakim Lundeberg
13:30 - 14:15
Room: 122:026
14:15
DNA sequencing device from molecular sensor perspective
-
Anton Grigoriev
DNA sequencing device from molecular sensor perspective
Anton Grigoriev
14:15 - 14:40
Room: 122:026
14:40
Theoretical Study of Electronic Transport through DNA Nucleotides in a Graphene Nanogap
-
Jariyanee Prasongkit
Theoretical Study of Electronic Transport through DNA Nucleotides in a Graphene Nanogap
Jariyanee Prasongkit
14:40 - 15:00
Room: 122:026
15:00
coffee
coffee
15:00 - 15:30
Room: 122:026
15:30
Scanning Tunneling Microscopy of DNA Molecules Adsorbed on Carbon
-
Dmitry A. Yarotski
Scanning Tunneling Microscopy of DNA Molecules Adsorbed on Carbon
Dmitry A. Yarotski
15:30 - 16:15
Room: 122:026
16:15
Functionalized carbon nanoelectrodes as tunneling DNA sensors: A multiscale computational study
-
Yong-Hoon Kim
Functionalized carbon nanoelectrodes as tunneling DNA sensors: A multiscale computational study
Yong-Hoon Kim
16:15 - 17:00
Room: 122:026
Tuesday 11 June 2013
09:00
Single Molecule DNA and RNA Sequencing by Gating Nanopore systems
-
Tomoji Kawai
Single Molecule DNA and RNA Sequencing by Gating Nanopore systems
Tomoji Kawai
09:00 - 09:45
Room: 122:026
09:45
Electrical means to sequence DNA
-
Massimiliano Di Ventra
Electrical means to sequence DNA
Massimiliano Di Ventra
09:45 - 10:30
Room: 122:026
10:30
coffee
coffee
10:30 - 11:00
Room: 122:026
11:00
Using tunnelling current for sensing - an assessment
-
Tim Albrecht
Using tunnelling current for sensing - an assessment
Tim Albrecht
11:00 - 11:45
Room: 122:026
11:45
A first-principles approach to DNA fingerprinting on Graphene
-
Towfiq Ahmed
A first-principles approach to DNA fingerprinting on Graphene
Towfiq Ahmed
11:45 - 12:30
Room: 122:026
12:30
lunch
lunch
12:30 - 13:30
Room: 122:026
13:30
Probing DNA via thermal transport
-
Michael Zwolak
Probing DNA via thermal transport
Michael Zwolak
13:30 - 14:15
Room: 122:026
14:15
Statistical sampling of conductance through molecules and water
-
Ivan Rungger
Statistical sampling of conductance through molecules and water
Ivan Rungger
14:15 - 15:00
Room: 122:026
15:00
coffee
coffee
15:00 - 15:30
Room: 122:026
15:30
From statistics and dynamics of DNA translocation towards functionalized nanopores
-
Maria Fyta
From statistics and dynamics of DNA translocation towards functionalized nanopores
Maria Fyta
15:30 - 16:15
Room: 122:026
16:15
Control of the DNA Translocation Through the Various Types of Synthetic Nanopores
-
Predrag S. Krstic
Control of the DNA Translocation Through the Various Types of Synthetic Nanopores
Predrag S. Krstic
16:15 - 17:00
Room: 122:026
17:00
BBQ dinner
BBQ dinner
17:00 - 20:00
Room: 122:026
Wednesday 12 June 2013
09:00
Devices and Methods for Nucleic Acid Sequencing Using Nanopores
-
Clive G. Brown
(
C.T.O. Oxford Nanopore Technologies
)
Devices and Methods for Nucleic Acid Sequencing Using Nanopores
Clive G. Brown
(
C.T.O. Oxford Nanopore Technologies
)
09:00 - 09:45
Room: 122:026
09:45
Label-free separation of DNA fragments in microfluidic devices
-
Ralf Eichhorn
Label-free separation of DNA fragments in microfluidic devices
Ralf Eichhorn
09:45 - 10:30
Room: 122:026
10:30
coffee
coffee
10:30 - 11:00
Room: 122:026
11:00
Graphene nanopores for DNA sensing
-
Stephanie Heerema
Graphene nanopores for DNA sensing
Stephanie Heerema
11:00 - 11:45
Room: 122:026
11:45
Controlled healing of graphene nanopore
-
Konstantin Zakharchenko
Controlled healing of graphene nanopore
Konstantin Zakharchenko
11:45 - 12:30
Room: 122:026
12:30
lunch
lunch
12:30 - 13:30
Room: 122:026
13:30
Glass Nanopores as Single Molecule Detectors
-
Lorenz J. Steinbock
Glass Nanopores as Single Molecule Detectors
Lorenz J. Steinbock
13:30 - 14:15
Room: 122:026
14:15
discussion time / free time
discussion time / free time
14:15 - 17:00
Room: 122:026
Thursday 13 June 2013
09:00
DNA origami nanopores for controlling DNA translocation
-
Ulrich Keyser
DNA origami nanopores for controlling DNA translocation
Ulrich Keyser
09:00 - 09:45
Room: 122:026
09:45
Graphene/h-BN/Graphene nanopore for single-molecule detection
-
Yuhui He
Graphene/h-BN/Graphene nanopore for single-molecule detection
Yuhui He
09:45 - 10:30
Room: 122:026
10:30
coffee
coffee
10:30 - 11:00
Room: 122:026
11:00
Nanoscale Carbon for DNA Sequencing and Drug Delivery
-
Oleg Prezhdo
Nanoscale Carbon for DNA Sequencing and Drug Delivery
Oleg Prezhdo
11:00 - 11:45
Room: 122:026
11:45
Four-terminal graphene nanoribbon crossbars with a nanopore for DNA sequencing via multiple transverse currents measurement
-
Branislav K. Nikolic
Four-terminal graphene nanoribbon crossbars with a nanopore for DNA sequencing via multiple transverse currents measurement
Branislav K. Nikolic
11:45 - 12:30
Room: 122:026
12:30
lunch
lunch
12:30 - 13:30
Room: 122:026
13:30
Fano Resonance Driven Molecular Electronics Spectroscopy and Fast DNA Sequencing
-
Kwang S. Kim
Fano Resonance Driven Molecular Electronics Spectroscopy and Fast DNA Sequencing
Kwang S. Kim
13:30 - 14:15
Room: 122:026
14:15
New alternatives to improve biomolecule-sensing using 2D nanodevices
-
Rodrigo G. Amorim
New alternatives to improve biomolecule-sensing using 2D nanodevices
Rodrigo G. Amorim
14:15 - 15:00
Room: 122:026
15:00
coffee
coffee
15:00 - 15:30
Room: 122:026
15:30
AlbaNova/Nordita Colloquium
AlbaNova/Nordita Colloquium
15:30 - 16:30
Room: 122:026
17:00
BBQ dinner
BBQ dinner
17:00 - 20:00
Room: 122:026
Friday 14 June 2013
09:00
A variety of solid-state nanopores for single-molecule analysis
-
Cees Dekker
A variety of solid-state nanopores for single-molecule analysis
Cees Dekker
09:00 - 09:45
Room: 122:026
09:45
DNA Translocation through Graphene Nanopores and the Sequencing Problem: A Theoretical Study
-
Dmitry A. Ryndyk
DNA Translocation through Graphene Nanopores and the Sequencing Problem: A Theoretical Study
Dmitry A. Ryndyk
09:45 - 10:30
Room: 122:026
10:30
coffee
coffee
10:30 - 11:00
Room: 122:026
11:00
QM/MM Nonequilibrium Green's function approach to simulating DNA sequencing using graphene nanopores
-
Alexandre Reily Rocha
QM/MM Nonequilibrium Green's function approach to simulating DNA sequencing using graphene nanopores
Alexandre Reily Rocha
11:00 - 11:30
Room: 122:026
11:30
Graphene-based DNA sequencing devices and the effect of the environment: A NEGF/QMMM hybrid study
-
Gustavo Troiano Feliciano
Graphene-based DNA sequencing devices and the effect of the environment: A NEGF/QMMM hybrid study
Gustavo Troiano Feliciano
11:30 - 12:00
Room: 122:026
12:00
concluding remarks
concluding remarks
12:00 - 12:30
Room: 122:026
12:30
lunch
lunch
12:30 - 13:30
Room: 122:026
13:30
departure
departure
13:30 - 14:30
Room: 122:026