Eco-Evolutionary Processes in Context: a Statistical Physics Approach
from
Monday, 7 July 2025 (09:00)
to
Friday, 25 July 2025 (19:00)
Monday, 7 July 2025
13:15
Registration
Registration
13:15 - 14:00
Room: Floor 6
14:00
Introduction
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Fernanda Pinheiro
Introduction
Fernanda Pinheiro
14:00 - 14:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
14:30
How do single bacterial cells think?
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Erik Van Nimwegen
How do single bacterial cells think?
Erik Van Nimwegen
14:30 - 15:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:15
Break
Break
15:15 - 15:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:30
Evolution of resource investment and behavior in motile bacteria
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Victor Sourjik
Evolution of resource investment and behavior in motile bacteria
Victor Sourjik
15:30 - 16:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Tuesday, 8 July 2025
10:15
Physiological constraints on long-term laboratory evolution
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Matt Scott
Physiological constraints on long-term laboratory evolution
Matt Scott
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Evolution of error correction through a need for speed
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Arvind Murugan
Evolution of error correction through a need for speed
Arvind Murugan
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 12:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:15
Emergent time scales of epistasis in protein evolution
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Francesco Zamponi
Emergent time scales of epistasis in protein evolution
Francesco Zamponi
12:15 - 13:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Wednesday, 9 July 2025
10:15
Global epistasis and some side effects of adaptation
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Sergey Kryazhimsky
Global epistasis and some side effects of adaptation
Sergey Kryazhimsky
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Contingency and selection in mitochondrial genome dynamics
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Sid Goyal
Contingency and selection in mitochondrial genome dynamics
Sid Goyal
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 12:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:15
Trainee flash talk
12:15 - 12:45
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:45
Break
Break
12:45 - 15:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:00
Poster session
15:00 - 16:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
16:30
BBQ
BBQ
16:30 - 18:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Thursday, 10 July 2025
10:15
Competition at the front of expanding populations
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Mehran Kardar
Competition at the front of expanding populations
Mehran Kardar
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Physiological heterogeneity of microbes and the fate of treatment: predicting persistence and recurrence under phage and antibiotic pressure
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Somenath Bakshi
Physiological heterogeneity of microbes and the fate of treatment: predicting persistence and recurrence under phage and antibiotic pressure
Somenath Bakshi
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 15:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:00
Nordita Colloquium (and Fika) Viruses and us: the evolution of an ecosystem
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Michael Lässig
Nordita Colloquium (and Fika) Viruses and us: the evolution of an ecosystem
Michael Lässig
15:00 - 16:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Friday, 11 July 2025
10:15
Evolution of excitable cells
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Jose Davila-Velderrain
Evolution of excitable cells
Jose Davila-Velderrain
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Just like us: hungry bacteria under stress
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Fernanda Pinheiro
Just like us: hungry bacteria under stress
Fernanda Pinheiro
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Saturday, 12 July 2025
Sunday, 13 July 2025
Monday, 14 July 2025
14:00
Introduction
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Fernanda Pinheiro
Introduction
Fernanda Pinheiro
14:00 - 14:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
14:30
Physical constraints on antibody evolvability
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Shenshen Wang
Physical constraints on antibody evolvability
Shenshen Wang
14:30 - 15:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:15
Break
Break
15:15 - 15:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:30
Dynamics of adaptation of E. coli in the laboratory
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Olivier Tenaillon
Dynamics of adaptation of E. coli in the laboratory
Olivier Tenaillon
15:30 - 16:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Tuesday, 15 July 2025
10:15
Flow in the digestive tract: bacterial population dynamics, evolution, and interaction with the immune system
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Claude Loverdo
Flow in the digestive tract: bacterial population dynamics, evolution, and interaction with the immune system
Claude Loverdo
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
TBD
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Ben Greenbaum
TBD
Ben Greenbaum
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Expanding the space of self-reproducing RNA using generative models
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Martin Weigt
Expanding the space of self-reproducing RNA using generative models
Martin Weigt
12:00 - 12:45
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Wednesday, 16 July 2025
10:15
Evolutionary emergence of cooperativity in the game of Prisoner's Dilemma
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Alexandre Morozov
Evolutionary emergence of cooperativity in the game of Prisoner's Dilemma
Alexandre Morozov
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Population ecology of T cell compartmentalization and antigen specificity
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Andreas Meyer
Population ecology of T cell compartmentalization and antigen specificity
Andreas Meyer
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 12:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:15
Trainee flash talk: Trainee flash talk
Trainee flash talk
12:15 - 12:45
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:45
Break
Break
12:45 - 15:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:00
Poster session
15:00 - 16:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
16:30
BBQ
BBQ
16:30 - 18:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Thursday, 17 July 2025
10:15
Design principles of the killer T-cell response
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Armita Nourmohammad
Design principles of the killer T-cell response
Armita Nourmohammad
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Origin of eco-evolutionary processes in context of physics [1]
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Olivier Rivoire
Guy Bunin
Origin of eco-evolutionary processes in context of physics [1]
Olivier Rivoire
Guy Bunin
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 12:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:15
Origin of eco-evolutionary processes in context of physics [2]
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Guy Bunin
Olivier Rivoire
Origin of eco-evolutionary processes in context of physics [2]
Guy Bunin
Olivier Rivoire
12:15 - 13:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Friday, 18 July 2025
10:15
Toward phylodynamic models with interactions for quantitative immunology
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William DeWitt
Toward phylodynamic models with interactions for quantitative immunology
William DeWitt
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Impact of complex spatial population structures on biological evolution
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Anne-Florance Bitbol
Impact of complex spatial population structures on biological evolution
Anne-Florance Bitbol
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Saturday, 19 July 2025
Sunday, 20 July 2025
Monday, 21 July 2025
14:00
Introduction
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Fernanda Pinheiro
Introduction
Fernanda Pinheiro
14:00 - 14:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
14:30
Convergence in immune repertoires
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Aleksandra Walczak
Convergence in immune repertoires
Aleksandra Walczak
14:30 - 15:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:15
Break
Break
15:15 - 15:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:30
Understanding the Drivers of Antibiotic Treatment Failure: Canonical and Noncanonical Mechanisms
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Erdal Toprak
Understanding the Drivers of Antibiotic Treatment Failure: Canonical and Noncanonical Mechanisms
Erdal Toprak
15:30 - 16:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Tuesday, 22 July 2025
10:15
Bacterial responses to antibiotic stress: Resistance, tolerance and resilience
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Joachim Krug
Bacterial responses to antibiotic stress: Resistance, tolerance and resilience
Joachim Krug
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Memory durability and representation of the immune system
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John Tsang
Memory durability and representation of the immune system
John Tsang
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Wednesday, 23 July 2025
10:15
Viral evolution in antigenic and real spaces
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Thierry Mora
Viral evolution in antigenic and real spaces
Thierry Mora
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Higher-Order Interactions, Fitness Landscapes, Stability Measures, and Antibiotic Resistance
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Van Savage
Higher-Order Interactions, Fitness Landscapes, Stability Measures, and Antibiotic Resistance
Van Savage
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:00
Break
Break
12:00 - 12:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:15
Trainee flash talk
12:15 - 12:45
Room: Albano 3: 4205 - SU Conference Room (40 seats)
12:45
Break
Break
12:45 - 15:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
15:00
Poster session
15:00 - 16:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
16:30
BBQ
BBQ
16:30 - 18:30
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Thursday, 24 July 2025
10:15
Resilience of respiratory pathogens after COVID-19
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Sarah Cobey
Resilience of respiratory pathogens after COVID-19
Sarah Cobey
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Temporal Evolution of TCR Repertoires in Response to Antigen Exposure
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Asya Minervina
Temporal Evolution of TCR Repertoires in Response to Antigen Exposure
Asya Minervina
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
Friday, 25 July 2025
10:15
TCR overlap across patients and tissues reveal tissue-specific selection effects
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Yuval Elhanati
TCR overlap across patients and tissues reveal tissue-specific selection effects
Yuval Elhanati
10:15 - 11:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:00
Break
Break
11:00 - 11:15
Room: Albano 3: 4205 - SU Conference Room (40 seats)
11:15
Reverse Epitope Discovery: Identifying Antigens from TCR Repertoires
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Misha Pogorelyy
Reverse Epitope Discovery: Identifying Antigens from TCR Repertoires
Misha Pogorelyy
11:15 - 12:00
Room: Albano 3: 4205 - SU Conference Room (40 seats)