11–13 Jun 2014
Albanova University Centre
Europe/Stockholm timezone

Beyond the linear-noise approximation of stochastic biochemical networks

12 Jun 2014, 13:45
1h
FA32 (Albanova University Centre)

FA32

Albanova University Centre

Speaker

Ramon Grima (University of Edinburg)

Description

Exact solutions of the chemical master equation are only known for a handful of simple chemical systems. In the past decade, the linear-noise approximation (LNA) has become a popular means to systematically approximate the master equation and to hence obtain insight into the effect of noise on the dynamics of biochemical systems. However a number of assumptions underlying the LNA considerably limit its application to realistic biochemical networks; these are the assumptions that molecule numbers are not too small and that the probability distribution is unimodal. In this talk, I will discuss recent theoretical developments which (i) extend the LNA to multimodal systems, and (ii) correct the LNA estimates of mean concentrations and variances by consideration of higher-order terms in the system-size expansion. The usefulness of these methods to obtaining a more complete picture of stochastic biochemical dynamics will be showcased on various biochemical systems involving gene expression, feedback control, enzyme-mediated catalysis and circadian rhythms.

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