Name: Novel Approaches to DNA Sequencing
Start: 2013-06-10T09:30:00+02:00
End: 2013-06-14T15:00:00+02:00
Location: No location set

Novel Approaches to DNA Sequencing

from Monday, 10 June 2013 (09:30) to Friday, 14 June 2013 (15:00)

Monday, 10 June 2013

09:30 Registration
Registration
09:30 - 10:30
Room: 122:026

10:30 welcome coffee
welcome coffee
10:30 - 11:00
Room: 122:026
11:00 Cranking up the signal-to-noise ratio at MHz bandwidth - Marija Drndic
Cranking up the signal-to-noise ratio at MHz bandwidth
- Marija Drndic
11:00 - 11:45
Room: 122:026
11:45 Using heat, charge and electric field to control DNA translocation through nanopores - Aleksei Aksimentiev
Using heat, charge and electric field to control DNA translocation through nanopores
- Aleksei Aksimentiev
11:45 - 12:30
Room: 122:026
12:30 lunch
lunch
12:30 - 13:30
Room: 122:026
13:30 Massively parallel sequencing used for single cells at SciLifeLab - Joakim Lundeberg
Massively parallel sequencing used for single cells at SciLifeLab
- Joakim Lundeberg
13:30 - 14:15
Room: 122:026
14:15 DNA sequencing device from molecular sensor perspective - Anton Grigoriev
DNA sequencing device from molecular sensor perspective
- Anton Grigoriev
14:15 - 14:40
Room: 122:026
14:40 Theoretical Study of Electronic Transport through DNA Nucleotides in a Graphene Nanogap - Jariyanee Prasongkit
Theoretical Study of Electronic Transport through DNA Nucleotides in a Graphene Nanogap
- Jariyanee Prasongkit
14:40 - 15:00
Room: 122:026
15:00 coffee
coffee
15:00 - 15:30
Room: 122:026
15:30 Scanning Tunneling Microscopy of DNA Molecules Adsorbed on Carbon - Dmitry A. Yarotski
Scanning Tunneling Microscopy of DNA Molecules Adsorbed on Carbon
- Dmitry A. Yarotski
15:30 - 16:15
Room: 122:026
16:15 Functionalized carbon nanoelectrodes as tunneling DNA sensors: A multiscale computational study - Yong-Hoon Kim
Functionalized carbon nanoelectrodes as tunneling DNA sensors: A multiscale computational study
- Yong-Hoon Kim
16:15 - 17:00
Room: 122:026
Tuesday, 11 June 2013
09:00 Single Molecule DNA and RNA Sequencing by Gating Nanopore systems - Tomoji Kawai
Single Molecule DNA and RNA Sequencing by Gating Nanopore systems
- Tomoji Kawai
09:00 - 09:45
Room: 122:026
09:45 Electrical means to sequence DNA - Massimiliano Di Ventra
Electrical means to sequence DNA
- Massimiliano Di Ventra
09:45 - 10:30
Room: 122:026
10:30 coffee
coffee
10:30 - 11:00
Room: 122:026
11:00 Using tunnelling current for sensing - an assessment - Tim Albrecht
Using tunnelling current for sensing - an assessment
- Tim Albrecht
11:00 - 11:45
Room: 122:026
11:45 A first-principles approach to DNA fingerprinting on Graphene - Towfiq Ahmed
A first-principles approach to DNA fingerprinting on Graphene
- Towfiq Ahmed
11:45 - 12:30
Room: 122:026
12:30 lunch
lunch
12:30 - 13:30
Room: 122:026
13:30 Probing DNA via thermal transport - Michael Zwolak
Probing DNA via thermal transport
- Michael Zwolak
13:30 - 14:15
Room: 122:026
14:15 Statistical sampling of conductance through molecules and water - Ivan Rungger
Statistical sampling of conductance through molecules and water
- Ivan Rungger
14:15 - 15:00
Room: 122:026
15:00 coffee
coffee
15:00 - 15:30
Room: 122:026
15:30 From statistics and dynamics of DNA translocation towards functionalized nanopores - Maria Fyta
From statistics and dynamics of DNA translocation towards functionalized nanopores
- Maria Fyta
15:30 - 16:15
Room: 122:026
16:15 Control of the DNA Translocation Through the Various Types of Synthetic Nanopores - Predrag S. Krstic
Control of the DNA Translocation Through the Various Types of Synthetic Nanopores
- Predrag S. Krstic
16:15 - 17:00
Room: 122:026
17:00 BBQ dinner
BBQ dinner
17:00 - 20:00
Room: 122:026
Wednesday, 12 June 2013
09:00 Devices and Methods for Nucleic Acid Sequencing Using Nanopores - Clive G. Brown (C.T.O. Oxford Nanopore Technologies)
Devices and Methods for Nucleic Acid Sequencing Using Nanopores
- Clive G. Brown (C.T.O. Oxford Nanopore Technologies)
09:00 - 09:45
Room: 122:026
09:45 Label-free separation of DNA fragments in microfluidic devices - Ralf Eichhorn
Label-free separation of DNA fragments in microfluidic devices
- Ralf Eichhorn
09:45 - 10:30
Room: 122:026
10:30 coffee
coffee
10:30 - 11:00
Room: 122:026
11:00 Graphene nanopores for DNA sensing - Stephanie Heerema
Graphene nanopores for DNA sensing
- Stephanie Heerema
11:00 - 11:45
Room: 122:026
11:45 Controlled healing of graphene nanopore - Konstantin Zakharchenko
Controlled healing of graphene nanopore
- Konstantin Zakharchenko
11:45 - 12:30
Room: 122:026
12:30 lunch
lunch
12:30 - 13:30
Room: 122:026
13:30 Glass Nanopores as Single Molecule Detectors - Lorenz J. Steinbock
Glass Nanopores as Single Molecule Detectors
- Lorenz J. Steinbock
13:30 - 14:15
Room: 122:026
14:15 discussion time / free time
discussion time / free time
14:15 - 17:00
Room: 122:026
Thursday, 13 June 2013
09:00 DNA origami nanopores for controlling DNA translocation - Ulrich Keyser
DNA origami nanopores for controlling DNA translocation
- Ulrich Keyser
09:00 - 09:45
Room: 122:026
09:45 Graphene/h-BN/Graphene nanopore for single-molecule detection - Yuhui He
Graphene/h-BN/Graphene nanopore for single-molecule detection
- Yuhui He
09:45 - 10:30
Room: 122:026
10:30 coffee
coffee
10:30 - 11:00
Room: 122:026
11:00 Nanoscale Carbon for DNA Sequencing and Drug Delivery - Oleg Prezhdo
Nanoscale Carbon for DNA Sequencing and Drug Delivery
- Oleg Prezhdo
11:00 - 11:45
Room: 122:026
11:45 Four-terminal graphene nanoribbon crossbars with a nanopore for DNA sequencing via multiple transverse currents measurement - Branislav K. Nikolic
Four-terminal graphene nanoribbon crossbars with a nanopore for DNA sequencing via multiple transverse currents measurement
- Branislav K. Nikolic
11:45 - 12:30
Room: 122:026
12:30 lunch
lunch
12:30 - 13:30
Room: 122:026
13:30 Fano Resonance Driven Molecular Electronics Spectroscopy and Fast DNA Sequencing - Kwang S. Kim
Fano Resonance Driven Molecular Electronics Spectroscopy and Fast DNA Sequencing
- Kwang S. Kim
13:30 - 14:15
Room: 122:026
14:15 New alternatives to improve biomolecule-sensing using 2D nanodevices - Rodrigo G. Amorim
New alternatives to improve biomolecule-sensing using 2D nanodevices
- Rodrigo G. Amorim
14:15 - 15:00
Room: 122:026
15:00 coffee
coffee
15:00 - 15:30
Room: 122:026

15:30 AlbaNova/Nordita Colloquium
AlbaNova/Nordita Colloquium
15:30 - 16:30
Room: 122:026

17:00 BBQ dinner
BBQ dinner
17:00 - 20:00
Room: 122:026
Friday, 14 June 2013
09:00 A variety of solid-state nanopores for single-molecule analysis - Cees Dekker
A variety of solid-state nanopores for single-molecule analysis
- Cees Dekker
09:00 - 09:45
Room: 122:026
09:45 DNA Translocation through Graphene Nanopores and the Sequencing Problem: A Theoretical Study - Dmitry A. Ryndyk
DNA Translocation through Graphene Nanopores and the Sequencing Problem: A Theoretical Study
- Dmitry A. Ryndyk
09:45 - 10:30
Room: 122:026
10:30 coffee
coffee
10:30 - 11:00
Room: 122:026
11:00 QM/MM Nonequilibrium Green's function approach to simulating DNA sequencing using graphene nanopores - Alexandre Reily Rocha
QM/MM Nonequilibrium Green's function approach to simulating DNA sequencing using graphene nanopores
- Alexandre Reily Rocha
11:00 - 11:30
Room: 122:026
11:30 Graphene-based DNA sequencing devices and the effect of the environment: A NEGF/QMMM hybrid study - Gustavo Troiano Feliciano
Graphene-based DNA sequencing devices and the effect of the environment: A NEGF/QMMM hybrid study
- Gustavo Troiano Feliciano
11:30 - 12:00
Room: 122:026
12:00 concluding remarks
concluding remarks
12:00 - 12:30
Room: 122:026

12:30 lunch
lunch
12:30 - 13:30
Room: 122:026

13:30 departure
departure
13:30 - 14:30
Room: 122:026