27 February 2012 to 23 March 2012
Nordita
Europe/Stockholm timezone

Parameterisation aspects of atomistic and coarse-grained models of biomolecules

29 Feb 2012, 09:30
2h
132:028 (Nordita)

132:028

Nordita

Speaker

Prof. Alessandra Villa (Karolinska Institutet)

Description

Parametrization strategy in biomolecular atomistic force field. Design strategies to build a coarse grained model (mapping scheme, potentials, solvent description). Approach used to parametrize CG potentials (with attention to non-bonded interactions). Backmapping. Transferability problems. Example from a fragment-based coarse grained model for peptide. Brief introduction of possible approach to access multi-scale modeling.

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