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From Molecular Basis to Predictability and Control of Evolution

from Monday, 1 July 2019 (09:00) to Friday, 26 July 2019 (18:00)
Nordita, Stockholm (FB52)

        : Sessions
    /     : Talks
        : Breaks
1 Jul 2019
2 Jul 2019
3 Jul 2019
4 Jul 2019
5 Jul 2019
8 Jul 2019
9 Jul 2019
10 Jul 2019
11 Jul 2019
12 Jul 2019
15 Jul 2019
16 Jul 2019
17 Jul 2019
18 Jul 2019
19 Jul 2019
22 Jul 2019
23 Jul 2019
24 Jul 2019
25 Jul 2019
26 Jul 2019
AM
09:15 Welcome   (FB52)
09:30 TBA - Dan Andersson   (FB52)
11:00 TBA - Michael Laessig   (FB52)
09:30 Impact of a periodic presence of antimicrobial on resistance evolution in a microbial population - Anne-Florence Bitbol   (FB52)
11:00 How adaptive immunity governs co-evolution in microbes - Sidhartha Goyal   (FB52)
09:30 Forecasting experimental evolution in Pseudomonas - Peter Lind   (FB52)
11:00 Repeatability and predictability in microbial evolution - Richard Neher   (FB52)
09:30 Population size and the predictability of antibiotic resistance evolution - Arjan de Visser   (FB52)
11:00 TBA - Fernanda Pinheiro   (FB52)
09:30 Antigenic evolution of viruses in host populations - Igor Rouzine   (FB52)
11:00 Implications of HA protein stability on influenza A virus evolution - Roy Chadi   (FB52)
09:15 Welcome W2   (FB52)
09:30 Gene transfer across bacterial subspecies rapidly navigates a complex fitness landscape - Berenike Maier   (FB52)
11:00 Mutational robustness as an evolutionary benefit of recombination - Joachim Krug   (FB52)
09:30 Predicting the fitness from protein sequence data - Simona Cocco   (FB52)
11:00 E. coli from fermentation to respiration: Pareto helps in a difficult choice - Enzo Marinari   (FB52)
09:30 TBA - Marta Luksza   (FB52)
11:00 Stochasticity and predictability in within-host viral evolution. - Chris Illingworth   (FB52)
09:30 Protein sequence landscapes: from data-driven models to protein design - Martin Weigt   (FB52)
11:00 Adaptation of olfactory receptor abundances to environmental changes - Remi Monasson   (FB52)
09:30 A universal biophysical model of codon bias - Alexandre Morozov   (FB52)
11:00 Analysis of Evolutionary Constraints and Plasticity by Microbial Laboratory Evolution and Computational Models - Chikara Furusawa   (FB52)
09:15 Welcome W3   (FB52)
09:30 TBA - Michael Laessig   (FB52)
11:00 TBA - Benjamin Good   (FB52)
09:30 Path integral control theory for the control of populations - Bert Kappen   (FB52)
11:00 Optimal evolutionary control of molecular phenotypes - Armita Nourmohammad   (FB52)
09:30 A bottom-up approach to microbial evolution and ecology - Jeff Gore   (FB52)
11:00 Plastic tradeoffs in evolution: a simple theoretical model - Mikhail Tikhonov   (FB52)
09:30 TBA - Oskar Hallatscheck   (FB52)
11:00 Emergence and propagation of epistasis in metabolic networks - Sergey Kryazhimzkiy   (FB52)
09:30 Antibody-mediated cross-linking of gut bacteria hinders the spread of antibiotic resistance - Claude Loverdo   (FB52)
11:00 High mutation rate evolution during adaptation to high salinity or sub-inhibitory concentrations of gentamicin - Stephanie Bedhomme   (FB52)
11:30 Dimension-Reduction Theory for Direction and Constraint in Phenotypic Evolution - Kunihiko Kaneko   (FB52)
09:15 Welcome W4   (FB52)
09:30 Physics and evolution of long-range effects in proteins - Olivier Rivoire   (FB52)
11:00 Phenotype evolution as optimization - Jakub Otwinowski   (FB52)
09:30 The sequence-affinity landscape of antibodies - Alexandra Walczak   (FB52)
11:00 Comprehensively mapping phenotypic tradeoffs and epistasis using microscopy-based deep mutational scanning at the million-mutant scale - Jacob Shenker   (FB52)
11:30 Inferring large cooperative patterns - Yaakov Kleeorin   (FB52)
09:30 Affinity maturation of antibodies and the puzzle of HIV low spike density - Mehran Kardar   (FB52)
11:00 Coevolution in the adaptive immune system - Armita Nourmohammad   (FB52)
11:30 Antibody affinity maturation as a model system for sequence evolution - William DeWitt   (FB52)
09:30 Identifying responding clonotypes in immune repertoires - Aleksandra Walczak   (FB52)
11:00 Methods for identification of condition-associated T-cell receptor clonotypes in RepSeq data - Mikhail Pogorelyy   (FB52)
11:30 Alterations in TCR repertoire after yellow fever vaccination and revaccination - Asya Minervina   (FB52)
09:30 Prediction in immune repertoires - Thierry Mora   (FB52)
11:00 Optimal Memory Strategies in the adaptive immune system - Oskar Schnaack   (FB52)
11:30 Featureless selection of informative neurons in the brain using MultiScale Relevance - Ryan Cubero   (FB52)
PM
14:00 A statistical-inference approach to access an ‘interaction’ pattern among migrating cells - Elena Agliari   (FB52)
14:30 An uncertainty law for microbial evolution - Kristina Krona   (FB52)
14:00 Toy models of evolved adapting machines - Matteo Marsili   (FB52)
14:30 Some recent progresses in Neural Networks & Machine Learning via Statistical Mechanics - Adriano Barra   (FB52)
15:15 Poster Flash Talks W1   (FB52)
16:00 Poster Session W1   (FB52)
14:00 Statistical genetics and DCA on the (bacterial) genome scale - Erik Aurell   (FB52)
14:30 Equivalent exposure histories produce wide spectrum of multidrug resistance outcomes contingent on drug order - Johannes Cairns   (FB52)
14:00 Towards infering Potts models for evolutionary correlated sequence data - Pierre Barrat-Charlaix   (FB52)
14:30 Inferring effects of mutation on fitness: testing for context dependence and invariance of mutation effects - Thomas Bataillon   (FB52)
15:15 Poster Flash talks W2   (FB52)
16:00 Poster session W2   (FB52)
14:00 TBA - Ceyhun Eskin   (FB52)
14:30 TBA - Colin LaMont   (FB52)
14:00 TBA - Claudia Bank   (FB52)
14:00 Interrogating evolution using robotics-assisted continuous evolution - Erika DeBenedictis   (FB52)
14:30 Evolution in fluctuating environment - Nadav Shnerb   (FB52)
15:30 Poster Flash Talks W3   (FB52)
16:00 Poster session W3   (FB52)
14:00 Does evolution care about bits? - Manuel Razo Mejia   (FB52)
14:30 The energetics of molecular adaptation: Mutations, epistasis, and allostery in transcriptional regulation - Griffin Chure   (FB52)
15:30 Poster Flash Talks W4   (FB52)
16:00 Poster Session W4   (FB52)